Literature

1. Paulus, H. (2000). Protein Splicing and Related forms of Protein Auto-processing. Annu. Rev. Biochem. 69: 447-96.

2. Pietrokovski, S. (1997). Modular orginazation of inteins and C-terminal autocatalytic domains. Protein science. 7: 64-71.

3. J. Peter Gogarten, Alireza G. Senejani, Olga Zhaxybayeva, Lorraine Olendzenski, and Elena Hilario (2002). Inteins: Structure, Function and Evolution. Annu. Rev. Microbiol. 56: 263-287.

4. Pietrokovski, S. (1994). Conserved sequence features of inteins (protein introns) and their use in identifying new inteins and related proteins. Protein Science, 3:2340-2350.

5. Francine B.Perler, Elaine O.Davis, Gary E.Dean, Frederick S.Gimble, William E.Jack, Norma Neff, Christopher J.Noren, Jeremy Thorner and Marlene Belfort (1994). Protein splicing elements: inteins and exteins a definition of terms and recommended nomenclature. Nucleic Acids Research, Vol. 22, No. 7: 1125-1127

6. Christopher J. Noren, Jimin Wang, and Francine B. Perler (2000). Dissecting the Chemistry of Protein Splicing and Its Applications. Angew. Chem. Int. Ed. 39: 450- 466.

7. Serge Saxonov, Iraj Daizadeh, Alexei Fedorov and Walter Gilbert (2000). EID: the Exon-Intron Database - an exhaustive database of protein-coding intron-containing genes. Nucleic Acids Research, Vol. 28, No. 1: 185-190.

8. Francine B. Perler (2002). InBase: the Intein Database. Nucleic Acids Res. 30(1): 383-384.

9. Perler F.B., Davis,E.O., Dean,G.E., Gimble,F.S., Jack,W.E., Neff,N., Noren,C.J., Thorner,J. and Belfort,M. (1994). Protein splicing elements: inteins and exteins-a definition of terms and recommended nomenclature. ,Nucleic Acids Res. 22: 1125-1127.

10. Paulus H. (2001). Inteins as enzymes. Bioorg. Chem.. 29, 119-129.

11. Perler F.B. and Adam,E. (2000). Protein splicing and its applications. Curr. Opin. Biotechnol, 11: 377-383.

12. R. David, M. P.O. Richter, and A. G. Beck-Sickinger, (2004). Expressed protein ligation: Method and applications. FEBS J. 271(4): 663 - 677.

13. Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, et al. (1997). Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25: 3389-402.

14. Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, et al. (2000). The Protein Data Bank. Nucleic Acids Res. 28: 235-42.

15. Blaschke UK, Silberstein J, Muir TW. (2000). Protein engineering by expressed protein ligation. Methods Enzymol, 328: 478-96.

16. Dawkins R. (1976). The Selfish Gene. Oxford, UK: Oxford Univ. Press 1997.

17. Derbyshire V, Wood DW, Wu W, Dansereau JT, Dalgaard JZ, Belfort M. (1997). Genetic definition of a protein-splicing domain: functional mini-inteins support structure predictions and a model for intein evolution. Proc. Natl. Acad. Sci. USA, 94: 11466-71.

18. Liu XQ. (2000). Protein-splicing intein: genetic mobility, origin, and evolution. Annu. Rev. Genet., 34: 61-76.

19. Mathys S, Evans TC, Chute IC, Wu H, Chong S, et al. (1999). Characterization of a self-splicing mini-intein and its conversion into autocatalytic N- and C-terminal cleavage elements: facile production of protein building blocks for protein ligation. Gene, 231: 1-13.

20. Xu MQ, Perler FB. (1996). The mechanism of protein splicing and its modulation by mutation. EMBO J. 15: 5146 - 5153.

21. Perler FB, Davis EO, Dean GE, Gimble FS, Jack WE, et al. (1994). Protein splicing elements: inteins and exteins-a definition of terms and recommended nomenclature. Nucleic Acids Res., 22:1125-27.

22. Perler FB, Olsen GJ, Adam E. (1997). Compilation and analysis of intein sequences. Nucleic Acids Res., 25:1087-93.

23. Perler FB, Xu MQ, Paulus H. (1997). Protein splicing and autoproteolysis mechanisms. Curr. Opin. Chem. Biol., 1:292- 99.

24. Pietrokovski S. (1996). A new intein in cyanobacteria and its significance for the spread of inteins. Trends Genet., 12:287- 88.

25. Pietrokovski S. (2001). Inteins- Protein Introns. http://bioinfo.weizmann.ac.il/~pietro/inteins.

26. Thomas C. Evans Jr., Jack Benner, and Ming-Qun Xu. (1999). The Cyclization and Polymerization of Bacterially Expressed Proteins Using Modified Self-splicing Inteins. J Biol Chem, Vol. 274, Issue June 25, 26: 18359-18363.

27. Maurice W. Southworth, Eric Adam, Daniel Panne, Robyn Byer, Roger Kautz and Francine B. Perler. (1998).Control of protein splicing by intein fragment reassembly.The EMBO Journal 17, 918-926.

28. Steffen Brenzel, Thomas Kurpiers, and Henning D. Mootz. (2005). Engineering Artificially Split Inteins for Applications in Protein Chemistry: Biochemical Characterization of the Split Ssp DnaB Intein and Comparison to the Split Sce VMA Intein. Biochemistry, 45 (6), 1571 -1578.

29. M.S.Jurica & B.L.Stoddard. (1999). Homing endonucleases:structure,function and evolution. CMLS,Cell.Mol.Life Sci.55: 1304 -1326.
30. Margaret I. Butler, Jeremy Gray, Timothy J. D. Goodwin, ussell T. M. Poulter (2006). The distribution and evolutionary history of the PRP8 intein. BMC Evolutionary Biology 2006, 6:42.

31. Henry Paulus. (1998). Protein splicing: A novel form of gene expression and paradigm for self-catalyzed protein rearrangements. Pure &App/. Chem., Vol. 70, No. 1, pp. 1-8.

32. Francine B.Perler. (2005). Protein Splicing Mechanisms and Applications. IUBMB Life ,57(7):469 -476.

33. Gil Amitai, Bareket Dassa, and Shmuel Pietrokovski. (2004). Protein Splicing of Inteins with Atypical Glutamine and Aspartate C-terminal Residues, THE JOURNAL OF BIOLOGICAL CHEMISTRY Vol. 279, No. 5, Issue of January 30, pp. 3121-3131.

34. Xiang-Qin L. (2000). PROTEIN-SPLICING INTEIN: Genetic Mobility, Origin, and Evolution, Annu. Rev. Genet. 34:61-76.

35. Altschul S.F., Gish W., Miller W., Myers E.W., and Limpan D.J. (1990). Basic Local Alignment search tool, J. Mol. Biol. 215: 403-410